Comparative Phenotype Report

LR_Report

15 April, 2021

1 Differential Analysis

1.1 CCI - Cell Cell Interaction

1.1.1 Interaction Plot (CCI)

Here the cell cell interaction is provided for each phenotype comparison

1.1.2 PCA CCI

Here a Principal Component Analysis (PCA) was done using the cell cell interaction topological measures.

1.1.3 Pagerank Log Ratio

1.1.4 CCI Table

1.1.4.1 Table PCA CCI EXP_x_CTR

1.2 CGI - Gene Cell Interaction

1.2.1 PCA GCI

Here a Principal Component Analysis (PCA) was done using the cell gene interaction topological measures. The high ranked observations (>=2\(\sigma\)) is labeled and each measure contribuition is placed

1.2.2 Pagerank Log Ratio

1.2.3 PCA GCI Table

1.2.3.1 Table PCA CGI EXP_x_CTR_ggi

1.2.4 TOP 100 per topological measure

1.3 Genes Sankey Plot

1.4 LR analysis data